Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link

hsa-miR-1293


Loading... Please wait, this might take a few seconds...



Filters
Clear all
Interactions: 202, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
PABPN1 hsa-miR-1293 low: 0 high: 6 1 1 1 0.707
High-throughput experiments (6 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr14:23325741-23325767 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr14:23325731-23325759 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr14:23325741-23325767 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr14:23325741-23325767 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr14:23325741-23325767 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr14:23325731-23325759 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FBRS hsa-miR-1293 low: 0 high: 5 1 1 1 -
High-throughput experiments (5 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr16:30664442-30664464 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr16:30664438-30664458 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr16:30664429-30664447 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr16:30664429-30664447 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr16:30664429-30664447 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HOXA9 hsa-miR-1293 low: 0 high: 4 1 1 1 0.476
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr7:27163506-27163533 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr7:27163506-27163533 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:27163085-27163108 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:27163085-27163108 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NACC1 hsa-miR-1293 low: 0 high: 4 1 1 1 0.661
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr19:13140262-13140289 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr19:13140262-13140289 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr19:13140262-13140289 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr19:13139855-13139878 HITS-CLIP POSITIVE DIRECT TarBase 7.0
QKI hsa-miR-1293 low: 0 high: 3 1 1 1 0.499
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr6:163570723-163570744 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr6:163570723-163570744 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr6:163570723-163570744 HITS-CLIP POSITIVE DIRECT TarBase 7.0
INPP5E hsa-miR-1293 low: 0 high: 3 1 1 1 0.488
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:emetine
Location Method Result Regulation Validation Type Source
chr9:136439727-136439753 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr9:136431970-136431992 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr9:136431970-136431992 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KIAA0284 hsa-miR-1293 low: 0 high: 3 1 1 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr14:104895148-104895170 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr14:104895148-104895170 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr14:104895138-104895164 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ATXN2L hsa-miR-1293 low: 0 high: 3 1 1 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr16:28836987-28837002 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr16:28836987-28837002 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr16:28836744-28836764 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NPTX1 hsa-miR-1293 low: 0 high: 3 1 1 1 0.629
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr17:80468266-80468290 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr17:80471003-80471031 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr17:80468266-80468290 HITS-CLIP POSITIVE DIRECT TarBase 7.0
BRD2 hsa-miR-1293 low: 0 high: 3 1 1 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr6:32971849-32971870 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr6:32972398-32972425 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr6:32971849-32971870 HITS-CLIP POSITIVE DIRECT TarBase 7.0
RBM12 hsa-miR-1293 low: 0 high: 3 1 1 1 0.525
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr20:35654620-35654641 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr20:35654620-35654641 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr20:35654602-35654626 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FBXL19 hsa-miR-1293 low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr16:30947302-30947326 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr16:30930470-30930491 HITS-CLIP POSITIVE DIRECT TarBase 7.0
E2F1 hsa-miR-1293 low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr20:33675761-33675781 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr20:33675761-33675781 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KDM5C hsa-miR-1293 low: 0 high: 2 1 1 1 0.668
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chrX:53192488-53192515 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chrX:53192488-53192515 HITS-CLIP POSITIVE DIRECT TarBase 7.0
THRA hsa-miR-1293 low: 0 high: 2 1 1 1 0.808
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr17:40091179-40091205 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:emetine
Location Method Result Regulation Validation Type Source
chr17:40074416-40074442 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CHAC1 hsa-miR-1293 low: 0 high: 2 1 1 1 0.459
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr15:40956089-40956103 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr15:40956089-40956103 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PUM1 hsa-miR-1293 low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr1:30932509-30932531 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:emetine
Location Method Result Regulation Validation Type Source
chr1:30932509-30932531 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CCDC64 hsa-miR-1293 low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr12:120094178-120094201 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:emetine
Location Method Result Regulation Validation Type Source
chr12:120094178-120094201 HITS-CLIP POSITIVE DIRECT TarBase 7.0
USP21 hsa-miR-1293 low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:emetine
Location Method Result Regulation Validation Type Source
chr1:161160912-161160925 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr1:161160454-161160475 HITS-CLIP POSITIVE DIRECT TarBase 7.0
RAVER1 hsa-miR-1293 low: 0 high: 2 1 1 1 0.556
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr19:10321210-10321231 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr19:10316701-10316726 HITS-CLIP POSITIVE DIRECT TarBase 7.0