Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-181d-5p


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Interactions: 1046, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
BCL2 hsa-miR-181d-5p low: 8 high: 1 3 5 4 -
Low-throughput experiments (8 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Wei Zhu et al. 2010 WB N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 6.0
Wei Zhu et al. 2010 RP Mammary Gland MDR N/A N/A
Location Method Result Regulation Validation Type Source
chr18:63125722-63125744 Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
Xie-Feng Wang et al. 2012 RP Brain U251 U251 N/A
Location Method Result Regulation Validation Type Source
chr18:63125438-63125889 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr18:63126443-63126910 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 RP Brain LN229 LN229 N/A
Location Method Result Regulation Validation Type Source
chr18:63125438-63125889 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr18:63126443-63126910 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr18:63126868-63126894 PAR-CLIP POSITIVE DIRECT TarBase 7.0
KRAS hsa-miR-181d-5p low: 6 high: 0 1 2 1 -
Low-throughput experiments (6 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 RP Brain U251 U251 N/A
Location Method Result Regulation Validation Type Source
chr12:25205417-25205768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr12:25208818-25209424 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 RP Brain LN229 LN229 N/A
Location Method Result Regulation Validation Type Source
chr12:25205417-25205768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr12:25208818-25209424 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MGMT hsa-miR-181d-5p low: 2 high: 0 3 2 2 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Simone Kr et al. 2013 RP Brain N/A U87 N/A
Location Method Result Regulation Validation Type Source
chr10:129766934-129767527 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Deepa Kushwaha et al. 2014 WB Brain T98G N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Other Databases
Publication Methods Tissue Cell line Tested cell line Exp. condition
Wei Zhang et al. 2012 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
Simone Kr et al. 2013 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
RAF1 hsa-miR-181d-5p low: 2 high: 0 1 2 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
EPHB2 hsa-miR-181d-5p low: 2 high: 0 1 2 1 -
Low-throughput experiments (0 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
AKT1 hsa-miR-181d-5p low: 2 high: 0 1 2 1 -
Low-throughput experiments (0 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
RAP1B hsa-miR-181d-5p low: 2 high: 0 1 1 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
She X. et al. 2014 RP Brain U251 U251 N/A
Location Method Result Regulation Validation Type Source
chr12:68660520-68660542 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
chr12:68660211-68660233 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
TAOK1 hsa-miR-181d-5p low: 0 high: 3 2 3 3 0.831
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29550658-29550689 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29550658-29550689 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29550651-29550678 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GIGYF1 hsa-miR-181d-5p low: 0 high: 8 3 3 2 -
High-throughput experiments (8 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:100680274-100680302 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr7:100680283-100680306 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100680283-100680306 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:100680283-100680306 PAR-CLIP POSITIVE DIRECT TarBase 7.0
COPS2 hsa-miR-181d-5p low: 0 high: 5 4 5 2 0.893
High-throughput experiments (5 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127005-49127032 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 HITS-CLIP POSITIVE DIRECT TarBase 7.0
AFF4 hsa-miR-181d-5p low: 0 high: 4 3 4 2 0.600
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132877355-132877388 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132880359-132880380 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Skalsky Rebecca L. et al. 2012 IP N/A EF3DAGO2 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132880359-132880380 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132880359-132880380 PAR-CLIP POSITIVE DIRECT TarBase 7.0
ZFAND6 hsa-miR-181d-5p low: 0 high: 4 3 4 3 -
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138039-80138075 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138032-80138059 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138032-80138059 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138032-80138059 PAR-CLIP POSITIVE DIRECT TarBase 7.0
RAN hsa-miR-181d-5p low: 0 high: 3 3 3 2 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:130876669-130876692 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr12:130876769-130876789 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr12:130876769-130876789 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Other Databases
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kasandra J Riley et al. 2012 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
ZFP36L2 hsa-miR-181d-5p low: 0 high: 3 4 4 4 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:43222523-43222549 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:43222530-43222553 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:43223103-43223129 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Other Databases
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kasandra J Riley et al. 2012 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
ZIC5 hsa-miR-181d-5p low: 0 high: 3 2 2 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:99964822-99964861 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr13:99964082-99964105 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr13:99964082-99964105 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PURB hsa-miR-181d-5p low: 0 high: 2 3 3 3 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:44882276-44882302 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:44880500-44880526 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Other Databases
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kasandra J Riley et al. 2012 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
ZIC2 hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:99986261-99986292 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Xue Y et al. 2013 IP Cervix HELA N/A Hela cells were treated with control shRNA.
Location Method Result Regulation Validation Type Source
chr13:99986598-99986626 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CDADC1 hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:49267732-49267754 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:49267730-49267752 PAR-CLIP POSITIVE DIRECT TarBase 7.0
ARRDC3 hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:91370523-91370553 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:91368905-91368928 PAR-CLIP POSITIVE DIRECT TarBase 7.0
INO80D hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:205999778-205999809 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:205993966-205993989 PAR-CLIP POSITIVE DIRECT TarBase 7.0