Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-181d-5p


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Interactions: 797, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
BCL2 hsa-miR-181d-5p low: 8 high: 1 3 5 4 -
Low-throughput experiments (8 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Wei Zhu et al. 2010 WB N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 6.0
Wei Zhu et al. 2010 RP Mammary Gland MDR N/A N/A
Location Method Result Regulation Validation Type Source
chr18:63125722-63125744 Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
Xie-Feng Wang et al. 2012 RP Brain U251 U251 N/A
Location Method Result Regulation Validation Type Source
chr18:63125438-63125889 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr18:63126443-63126910 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 RP Brain LN229 LN229 N/A
Location Method Result Regulation Validation Type Source
chr18:63125438-63125889 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr18:63126443-63126910 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr18:63126868-63126894 PAR-CLIP POSITIVE DIRECT TarBase 7.0
KRAS hsa-miR-181d-5p low: 6 high: 0 1 2 1 -
Low-throughput experiments (6 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 RP Brain U251 U251 N/A
Location Method Result Regulation Validation Type Source
chr12:25205417-25205768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr12:25208818-25209424 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 RP Brain LN229 LN229 N/A
Location Method Result Regulation Validation Type Source
chr12:25205417-25205768 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr12:25208818-25209424 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
MGMT hsa-miR-181d-5p low: 2 high: 0 2 2 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Simone Kr et al. 2013 RP Brain N/A U87 N/A
Location Method Result Regulation Validation Type Source
chr10:129766934-129767527 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Deepa Kushwaha et al. 2014 WB Brain T98G N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
RAF1 hsa-miR-181d-5p low: 2 high: 0 1 2 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
EPHB2 hsa-miR-181d-5p low: 2 high: 0 1 2 1 -
Low-throughput experiments (0 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
AKT1 hsa-miR-181d-5p low: 2 high: 0 1 2 1 -
Low-throughput experiments (0 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xie-Feng Wang et al. 2012 WB Brain U251 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
Xie-Feng Wang et al. 2012 WB Brain LN229 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
RAP1B hsa-miR-181d-5p low: 2 high: 0 1 1 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
She X. et al. 2014 RP Brain U251 U251 N/A
Location Method Result Regulation Validation Type Source
chr12:68660520-68660542 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
chr12:68660211-68660233 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
TAOK1 hsa-miR-181d-5p low: 0 high: 3 2 3 3 0.831
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29550658-29550689 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29550658-29550689 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29550651-29550678 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GIGYF1 hsa-miR-181d-5p low: 0 high: 8 3 3 2 -
High-throughput experiments (8 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:100680274-100680302 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr7:100680283-100680306 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100680283-100680306 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:100679939-100679961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:100680283-100680306 PAR-CLIP POSITIVE DIRECT TarBase 7.0
COPS2 hsa-miR-181d-5p low: 0 high: 5 4 5 2 0.893
High-throughput experiments (5 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127005-49127032 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr15:49127012-49127040 HITS-CLIP POSITIVE DIRECT TarBase 7.0
AFF4 hsa-miR-181d-5p low: 0 high: 4 3 4 2 0.600
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132877355-132877388 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132880359-132880380 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Skalsky Rebecca L. et al. 2012 IP N/A EF3DAGO2 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132880359-132880380 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:132880359-132880380 PAR-CLIP POSITIVE DIRECT TarBase 7.0
ZFAND6 hsa-miR-181d-5p low: 0 high: 4 3 4 3 -
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138039-80138075 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138032-80138059 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138032-80138059 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80138032-80138059 PAR-CLIP POSITIVE DIRECT TarBase 7.0
RAN hsa-miR-181d-5p low: 0 high: 3 2 2 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:130876669-130876692 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: emetine
Location Method Result Regulation Validation Type Source
chr12:130876769-130876789 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr12:130876769-130876789 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZFP36L2 hsa-miR-181d-5p low: 0 high: 3 3 3 3 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:43222523-43222549 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:43222530-43222553 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:43223103-43223129 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZIC5 hsa-miR-181d-5p low: 0 high: 3 2 2 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:99964822-99964861 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr13:99964082-99964105 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment: arsenite
Location Method Result Regulation Validation Type Source
chr13:99964082-99964105 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PURB hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:44882276-44882302 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:44880500-44880526 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZIC2 hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:99986261-99986292 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Xue Y et al. 2013 IP Cervix HELA N/A Hela cells were treated with control shRNA.
Location Method Result Regulation Validation Type Source
chr13:99986598-99986626 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CDADC1 hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:49267732-49267754 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:49267730-49267752 PAR-CLIP POSITIVE DIRECT TarBase 7.0
ARRDC3 hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:91370523-91370553 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:91368905-91368928 PAR-CLIP POSITIVE DIRECT TarBase 7.0
INO80D hsa-miR-181d-5p low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:205999778-205999809 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:205993966-205993989 PAR-CLIP POSITIVE DIRECT TarBase 7.0