Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-320a


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Interactions: 1401, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
GNAI1 hsa-miR-320a low: 1 high: 7 3 3 3 0.924
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Yao Jian et al. 2012 RP Liver HCC Cell Lines HEK293T N/A
Location Method Result Regulation Validation Type Source
chr7:80217912-80217931 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
High-throughput experiments (7 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Boudreau RL et al. 2014 IP Brain N/A N/A N/A
Location Method Result Regulation Validation Type Source
chr7:80217903-80217925 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:80217903-80217925 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:80217903-80217925 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:80217903-80217925 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:80217903-80217925 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:80217903-80217925 HITS-CLIP POSITIVE DIRECT TarBase 8.0
Kishore S et al. 2011 IP Kidney HEK293 N/A mild MNase digestion
Location Method Result Regulation Validation Type Source
chr7:80217903-80217925 PAR-CLIP POSITIVE DIRECT TarBase 7.0
IGF1R hsa-miR-320a low: 1 high: 2 3 3 3 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ling S. et al. 2013 RP Vascular VSMC HEK293 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland MCF7 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:98961317-98961345 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Hafner M. et al. 2010 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN PAR-CLIP POSITIVE DIRECT TarBase 6.0
RBFOX2 hsa-miR-320a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Qin Yan et al. 2013 RP Bone Marrow BCBL1 HEK293T N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
MT-ND5 hsa-miR-320a low: 0 high: 6 1 1 1 -
High-throughput experiments (6 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Moore M et al. 2015 IP Liver HUH7.5 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:12751-12826 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:14052-14127 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:13134-13209 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:13769-13844 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:13946-14021 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:13635-13710 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
MT-ND4 hsa-miR-320a low: 0 high: 5 2 2 2 -
High-throughput experiments (5 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Moore M et al. 2015 IP Liver HUH7.5 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:11607-11682 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:12033-12108 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:11341-11416 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:11035-11110 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:11493-11545 CLASH POSITIVE DIRECT TarBase 7.0
MT-CYB hsa-miR-320a low: 0 high: 4 1 1 1 -
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Moore M et al. 2015 IP Liver HUH7.5 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:15091-15166 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:15409-15484 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:14923-14998 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:15827-15902 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
TET3 hsa-miR-320a low: 0 high: 13 7 10 5 0.453
High-throughput experiments (13 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106975-74107000 Chimeric fragments POSITIVE DIRECT TarBase 8.0
chr2:74105963-74105993 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Whisnant Adam W et al. 2013 IP Cervix TZMBL N/A shRNAs against HIV-1
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Skalsky Rebecca L. et al. 2012 IP N/A LCLBAC N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Skalsky Rebecca L. et al. 2012 IP N/A LCLBACD3 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Skalsky Rebecca L. et al. 2012 IP N/A LCLBACD1 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Skalsky Rebecca L. et al. 2012 IP N/A LCL35 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Pillai MM et al. 2014 IP Mammary Gland MCF7 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74102211-74102238 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Kishore S et al. 2011 IP Kidney HEK293 N/A mild MNase digestion
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Karginov FV et al. 2013 IP Kidney 293S N/A treatment:hippuristanol
Location Method Result Regulation Validation Type Source
chr2:74102915-74102942 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC3 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
chr2:74105046-74105065 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74106974-74106995 PAR-CLIP POSITIVE DIRECT TarBase 7.0
PAPOLA hsa-miR-320a low: 0 high: 6 4 3 2 -
High-throughput experiments (6 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr14:96520108-96520130 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Boudreau RL et al. 2014 IP Brain N/A N/A N/A
Location Method Result Regulation Validation Type Source
chr14:96532564-96532591 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr14:96532564-96532591 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr14:96532564-96532591 HITS-CLIP POSITIVE DIRECT TarBase 8.0
Kishore S et al. 2011 IP Kidney HEK293 N/A mild MNase digestion
Location Method Result Regulation Validation Type Source
chr14:96532564-96532591 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chr14:96564984-96565042 CLASH POSITIVE DIRECT TarBase 7.0
KLHL15 hsa-miR-320a low: 0 high: 5 3 1 1 0.897
High-throughput experiments (5 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chrX:23985054-23985076 Chimeric fragments POSITIVE DIRECT TarBase 8.0
chrX:23986105-23986127 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Sebastian Memczak et al. 2013 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chrX:23986107-23986128 PAR-CLIP POSITIVE DIRECT TarBase 7.0
chrX:23984460-23984480 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Kishore S et al. 2011 IP Kidney HEK293 N/A mild MNase digestion
Location Method Result Regulation Validation Type Source
chrX:23986107-23986128 PAR-CLIP POSITIVE DIRECT TarBase 7.0
IGF2BP3 hsa-miR-320a low: 0 high: 4 4 4 2 -
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:23312172-23312194 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Karginov FV et al. 2013 IP Kidney 293S N/A no treatment (control)
Location Method Result Regulation Validation Type Source
chr7:23312156-23312183 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:23312123-23312209 CLASH POSITIVE DIRECT TarBase 7.0
Haecker Irina et al. 2012 IP Bone Marrow BCBL1 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:23312156-23312183 HITS-CLIP POSITIVE DIRECT TarBase 7.0
G3BP1 hsa-miR-320a low: 0 high: 3 2 3 2 0.549
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr5:151790988-151791020 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:151790988-151791020 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:151805696-151805720 PAR-CLIP POSITIVE DIRECT TarBase 7.0
PDSS1 hsa-miR-320a low: 0 high: 3 3 3 2 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr10:26746424-26746447 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Pillai MM et al. 2014 IP Mammary Gland MCF7 N/A N/A
Location Method Result Regulation Validation Type Source
chr10:26746424-26746444 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chr10:26746410-26746476 CLASH POSITIVE DIRECT TarBase 7.0
ZNF507 hsa-miR-320a low: 0 high: 3 2 2 2 0.829
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr19:32385918-32385947 Chimeric fragments POSITIVE DIRECT TarBase 8.0
chr19:32382872-32382901 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr19:32384760-32384782 PAR-CLIP POSITIVE DIRECT TarBase 7.0
UTP14C hsa-miR-320a low: 0 high: 3 2 1 1 0.857
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:52032353-52032383 Chimeric fragments POSITIVE DIRECT TarBase 8.0
chr13:52032784-52032806 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Kishore S et al. 2011 IP Kidney HEK293 N/A mild MNase digestion
Location Method Result Regulation Validation Type Source
chr13:52032783-52032805 PAR-CLIP POSITIVE DIRECT TarBase 7.0
ANP32B hsa-miR-320a low: 0 high: 2 2 2 1 0.612
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:98015759-98015791 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:98005015-98005093 CLASH POSITIVE DIRECT TarBase 7.0
MT-CO2 hsa-miR-320a low: 0 high: 2 2 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Moore M et al. 2015 IP Liver HUH7.5 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:7792-7867 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:7805-7864 CLASH POSITIVE DIRECT TarBase 7.0
MT-ND1 hsa-miR-320a low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Moore M et al. 2015 IP Liver HUH7.5 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:3783-3858 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:3515-3590 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
MT-CO3 hsa-miR-320a low: 0 high: 2 1 1 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Moore M et al. 2015 IP Liver HUH7.5 N/A N/A
Location Method Result Regulation Validation Type Source
chrMT:9247-9389 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
chrMT:9527-9602 CLEAR-CLIP POSITIVE DIRECT TarBase 8.0
EIF3L hsa-miR-320a low: 0 high: 2 2 2 2 0.471
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Pleura B lymphocyte N/A N/A
Location Method Result Regulation Validation Type Source
chr22:37874393-37874425 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Helwak Aleksandra et al. 2013 IP Kidney FLPIN_TREX_293 N/A N/A
Location Method Result Regulation Validation Type Source
chr22:37888526-37888600 CLASH POSITIVE DIRECT TarBase 7.0
CLTC hsa-miR-320a low: 0 high: 2 1 2 2 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Grosswendt S et al. 2014 IP Embryo ESC N/A N/A
Location Method Result Regulation Validation Type Source
chr17:59681293-59681322 Chimeric fragments POSITIVE DIRECT TarBase 8.0
Grosswendt S et al. 2014 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:59679400-59679429 Chimeric fragments POSITIVE DIRECT TarBase 8.0