Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-642b-3p


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Interactions: 48, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
ZC3H11A hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr1:203800256-203800277 HITS-CLIP POSITIVE DIRECT TarBase 7.0
AP3D1 hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.625
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr19:2101025-2101048 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KLF6 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr10:3778907-3778928 HITS-CLIP POSITIVE DIRECT TarBase 7.0
UQCC1 hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.497
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr20:35394137-35394156 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SERPINE1 hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.879
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr7:101138648-101138670 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PRKAR1A hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr17:68531603-68531625 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SLC29A1 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr6:44233863-44233883 HITS-CLIP POSITIVE DIRECT TarBase 7.0
INO80D hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.789
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr2:206003819-206003846 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MEF2D hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.552
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr1:156465718-156465741 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TRIM32 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Skalsky Rebecca L. et al. 2012 IP N/A LCLBACD3 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:116700536-116700557 PAR-CLIP POSITIVE DIRECT TarBase 7.0
YPEL5 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr2:30160065-30160078 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MAPK8IP1 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr11:45905187-45905214 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SDC4 hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.529
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr20:45326162-45326186 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CDKN1A hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Skalsky Rebecca L. et al. 2012 IP N/A LCLBACD1 N/A N/A
Location Method Result Regulation Validation Type Source
chr6:36687174-36687193 PAR-CLIP POSITIVE DIRECT TarBase 7.0
C3 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr19:6685067-6685088 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HNRNPH2 hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.570
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chrX:101413834-101413862 HITS-CLIP POSITIVE DIRECT TarBase 7.0
LOXL2 hsa-miR-642b-3p low: 0 high: 1 1 1 1 0.809
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr8:23297234-23297261 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KIAA1468 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Skalsky Rebecca L. et al. 2012 IP N/A LCLBACD3 N/A N/A
Location Method Result Regulation Validation Type Source
chr18:62264769-62264786 PAR-CLIP POSITIVE DIRECT TarBase 7.0
PIM1 hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr6:37174844-37174856 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HADH hsa-miR-642b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr4:108034859-108034883 HITS-CLIP POSITIVE DIRECT TarBase 7.0