Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-let-7a-2-3p


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Interactions: 23, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
MGMT hsa-let-7a-2-3p low: 2 high: 1 1 2 1 -
Low-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Deepa Kushwaha et al. 2014 WB Brain T98G N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Deepa Kushwaha et al. 2014 WB Brain LN340 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Deepa Kushwaha et al. 2014 MA Brain T98G N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
TP53INP1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr8:94930069-94930087 HITS-CLIP POSITIVE DIRECT TarBase 7.0
B4GALT1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.575
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr9:33113181-33113200 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CEMIP hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr15:80951299-80951317 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZFAND5 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.877
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr9:72354552-72354577 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZMIZ1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.833
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr10:79315746-79315770 HITS-CLIP POSITIVE DIRECT TarBase 7.0
EFEMP1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.788
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr2:55866961-55866968 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ELF1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr13:40941007-40941035 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZMYM2 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr13:20027265-20027283 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CALD1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr7:134969460-134969485 HITS-CLIP POSITIVE DIRECT TarBase 7.0
AHNAK hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.604
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr11:62515931-62515951 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ELOF1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr19:11553783-11553804 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KLF4 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.720
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr9:107485296-107485323 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ATP6V1G1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.537
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr9:114597894-114597912 HITS-CLIP POSITIVE DIRECT TarBase 7.0
THBS1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.524
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr15:39584102-39584120 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ARHGDIA hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr17:81869187-81869211 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MCL1 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 0.741
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr1:150576904-150576922 HITS-CLIP POSITIVE DIRECT TarBase 7.0
IGFBP3 hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr7:45913446-45913452 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ADM hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr11:10307049-10307074 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PPP4C hsa-let-7a-2-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HMSC N/A N/A
Location Method Result Regulation Validation Type Source
chr16:30082521-30082533 HITS-CLIP POSITIVE DIRECT TarBase 7.0