Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-147a


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Interactions: 3584, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
EHD2 hsa-miR-147a low: 1 high: 1 2 2 2 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
INPP5A hsa-miR-147a low: 1 high: 1 2 2 2 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
MAPK6 hsa-miR-147a low: 1 high: 1 2 2 2 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
ALDH5A1 hsa-miR-147a low: 1 high: 1 2 2 2 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
SH3BGRL hsa-miR-147a low: 1 high: 1 2 2 2 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
High-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays NEGATIVE INDIRECT TarBase 8.0
NDUFA4 hsa-miR-147a low: 1 high: 1 2 2 2 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
chr7:10933234-10933605 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
VEGFA hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ye Wenbin et al. 2008 RP Kidney COS7 COS7 N/A
Location Method Result Regulation Validation Type Source
chr6:43785351-43785379 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
BDKRB2 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
COL4A2 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
E2F3 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
FOXN3 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
IGFBP3 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
IER5 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
MCM3 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
chr6:52264154-52264420 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
PSMA4 hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
chr15:78548836-78549187 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
SDHD hsa-miR-147a low: 1 high: 0 1 1 1 -
Low-throughput experiments (0 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Thomas Bertero et al. 2012 RP Lung A549 A549 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay NEGATIVE DIRECT TarBase 8.0
VPS28 hsa-miR-147a low: 0 high: 3 1 2 1 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr8:144423732-144423739 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr8:144423713-144423735 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr8:144423713-144423735 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CCND1 hsa-miR-147a low: 0 high: 3 2 2 2 0.688
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr11:69652886-69652905 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr11:69652792-69652804 HITS-CLIP POSITIVE DIRECT TarBase 7.0
IARS hsa-miR-147a low: 0 high: 3 2 3 2 -
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:92210729-92210748 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr9:92210729-92210748 HITS-CLIP POSITIVE DIRECT TarBase 7.0
EMP1 hsa-miR-147a low: 0 high: 3 2 2 2 0.821
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lee et al. 2014 MA Intestine HCT116 N/A 3d post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:13215480-13215499 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr12:13215023-13215045 HITS-CLIP POSITIVE DIRECT TarBase 7.0