Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34a-5p


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Interactions: 6195, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
CD44 hsa-miR-34a-5p low: 12 high: 0 1 3 1 -
Low-throughput experiments (9 positive, 3 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Yu G et al. 2014 RP Kidney SN12PM6 SN12PM6 N/A
Location Method Result Regulation Validation Type Source
chr11:35231212-35231234 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr11:35229668-35229691 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney SN12PM6 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney ACHN N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney 786O N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 RP Kidney ACHN ACHN N/A
Location Method Result Regulation Validation Type Source
chr11:35231212-35231234 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr11:35229668-35229691 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Yu G et al. 2014 RP Kidney 786O 786O N/A
Location Method Result Regulation Validation Type Source
chr11:35231212-35231234 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr11:35229668-35229691 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
CDK6 hsa-miR-34a-5p low: 12 high: 9 8 8 5 -
Low-throughput experiments (11 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Yu G et al. 2014 WB qP Kidney SN12PM6 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney ACHN N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney 786O N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Fang Sun et al. 2008 RP Liver HEPG2 A549 N/A
Location Method Result Regulation Validation Type Source
chr7:92605952-92605974 Luciferase Reporter Assay POSITIVE DIRECT TarBase 6.0
Liu Can et al. 2011 WB O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 6.0
UNKNOWN Other POSITIVE INDIRECT TarBase 6.0
Lal Ashish et al. 2011 Bi Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP Bone Marrow K562 K562 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (9 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francisco Navarro et al. 2009 MA Bone Marrow K562 N/A 24hrs post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Sebastian Memczak et al. 2013 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:92614823-92614844 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Lal Ashish et al. 2011 MA Bi Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 MA Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
Kishore S et al. 2011 IP Kidney HEK293 N/A mild MNase digestion
Location Method Result Regulation Validation Type Source
chr7:92614055-92614082 PAR-CLIP POSITIVE DIRECT TarBase 7.0
chr7:92608184-92608206 PAR-CLIP POSITIVE DIRECT TarBase 7.0
Hafner M. et al. 2010 IP Kidney HEK293 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN PAR-CLIP POSITIVE DIRECT TarBase 6.0
NOTCH1 hsa-miR-34a-5p low: 11 high: 2 5 6 5 0.985
Low-throughput experiments (8 positive, 3 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Rui Du et al. 2012 WB qP Kidney HK2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Rui Du et al. 2012 RP Kidney HK2 HK2 N/A
Location Method Result Regulation Validation Type Source
chr9:136495884-136495922 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr9:136495155-136495193 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
Pang Ronald TK et al. 2013 WB qP Placenta JEG3 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Pang Ronald TK et al. 2013 WB qP Placenta BEWO N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Xiu-juan Li et al. 2012 WB qP Mammary Gland MCF7 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Xiu-juan Li et al. 2012 RP Mammary Gland MCF7 MCF7 N/A
Location Method Result Regulation Validation Type Source
chr9:136495884-136495905 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
Eva Gottwein et al. 2011 IP Pleura BC1 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:136495885-136495904 PAR-CLIP POSITIVE DIRECT TarBase 7.0
MCM5 hsa-miR-34a-5p low: 10 high: 3 2 2 2 -
Low-throughput experiments (5 positive, 5 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 WB qP Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr22:35424298-35424319 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr22:35424278-35424478 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr22:35424401-35424422 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
chr22:35424336-35424357 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
chr22:35424325-35424346 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
chr22:35424294-35424315 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
chr22:35424288-35424309 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
High-throughput experiments (2 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Tsung-Cheng Chang et al. 2007 MA Intestine HCT116 N/A 2w post retroviral infection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays NEGATIVE INDIRECT TarBase 8.0
Lal Ashish et al. 2011 MA Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
SNAI1 hsa-miR-34a-5p low: 9 high: 3 5 7 4 0.838
Low-throughput experiments (8 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Helge Siemens et al. 2011 RP Lung H1299 H1299 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Yu G et al. 2014 WB qP Kidney SN12PM6 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney ACHN N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney 786O N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Rui Du et al. 2012 WB qP Kidney HK2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francisco Navarro et al. 2009 MA Bone Marrow K562 N/A 24hrs post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Lal Ashish et al. 2011 Bi Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
MAP2K1 hsa-miR-34a-5p low: 8 high: 5 4 5 5 0.998
Low-throughput experiments (7 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Atsuhiko Ichimura et al. 2010 RP Kidney HEK293 HEK293 N/A
Location Method Result Regulation Validation Type Source
chr15:66491026-66491228 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Lal Ashish et al. 2011 WB qP Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr15:66491174-66491195 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr15:66490920-66490949 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr15:66490643-66491494 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr15:66490765-66490786 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
High-throughput experiments (5 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francisco Navarro et al. 2009 MA Bone Marrow K562 N/A 24hrs post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Boudreau RL et al. 2014 IP Brain N/A N/A N/A
Location Method Result Regulation Validation Type Source
chr15:66491173-66491195 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr15:66491173-66491195 HITS-CLIP POSITIVE DIRECT TarBase 8.0
Lal Ashish et al. 2011 MA Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
CCND3 hsa-miR-34a-5p low: 8 high: 1 2 5 3 0.658
Low-throughput experiments (5 positive, 3 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Yu G et al. 2014 qP Kidney SN12PM6 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 qP Kidney ACHN N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Yu G et al. 2014 qP Kidney 786O N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 qP Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr6:41935586-41935607 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr6:41934993-41935849 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr6:41935888-41935909 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
VIM hsa-miR-34a-5p low: 8 high: 0 2 4 1 -
Low-throughput experiments (8 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Yu G et al. 2014 WB qP Kidney SN12PM6 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney ACHN N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney 786O N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
Rui Du et al. 2012 WB O Kidney HK2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN Immunofluorescence POSITIVE INDIRECT TarBase 7.0
CDH1 hsa-miR-34a-5p low: 8 high: 0 2 4 1 0.661
Low-throughput experiments (0 positive, 8 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Yu G et al. 2014 WB qP Kidney SN12PM6 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney ACHN N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Yu G et al. 2014 WB qP Kidney 786O N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
UNKNOWN qPCR NEGATIVE INDIRECT TarBase 7.0
Rui Du et al. 2012 WB O Kidney HK2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot NEGATIVE INDIRECT TarBase 7.0
UNKNOWN Immunofluorescence NEGATIVE INDIRECT TarBase 7.0
AXL hsa-miR-34a-5p low: 7 high: 3 1 3 3 -
Low-throughput experiments (7 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 qP Bi Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 WB qP Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr19:41259934-41259955 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr19:41259933-41261734 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 Bi Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 MA Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
MCM2 hsa-miR-34a-5p low: 7 high: 4 4 4 4 -
Low-throughput experiments (5 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 WB qP Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr3:127622109-127622130 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr3:127621793-127622386 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr3:127622242-127622263 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
chr3:127622109-127622130 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
High-throughput experiments (3 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francisco Navarro et al. 2009 MA Bone Marrow K562 N/A 24hrs post-transfection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 8.0
Tsung-Cheng Chang et al. 2007 MA Intestine HCT116 N/A 2w post retroviral infection, Overexpression
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays NEGATIVE INDIRECT TarBase 8.0
Lal Ashish et al. 2011 MA Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
Kaller M et al. 2011 PR N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN pSILAC POSITIVE INDIRECT TarBase 6.0
CDK4 hsa-miR-34a-5p low: 7 high: 3 3 4 4 -
Low-throughput experiments (7 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Xiaohong Wang et al. 2011 WB N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 6.0
Liu Can et al. 2011 qP N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR POSITIVE INDIRECT TarBase 6.0
Lal Ashish et al. 2011 qP Bi Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 WB Lung A549 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP Bone Marrow K562 K562 N/A
Location Method Result Regulation Validation Type Source
chr12:57748265-57748496 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 MA Bone Marrow K562 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 MA Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-Microarrays POSITIVE INDIRECT TarBase 7.0
PIK3R2 hsa-miR-34a-5p low: 7 high: 1 1 2 2 -
Low-throughput experiments (6 positive, 1 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 WB qP Bi Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Biotin-qPCR POSITIVE INDIRECT TarBase 7.0
Lal Ashish et al. 2011 RP RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr19:18170442-18170463 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr19:18170424-18170445 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr19:18170291-18170312 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr19:18169555-18169576 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 MA Intestine HCT116 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Microarrays POSITIVE INDIRECT TarBase 7.0
MET hsa-miR-34a-5p low: 6 high: 4 2 2 2 0.967
Low-throughput experiments (4 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Lal Ashish et al. 2011 RP RP Cervix HELA HELA N/A
Location Method Result Regulation Validation Type Source
chr7:116798275-116798296 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr7:116798067-116798096 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr7:116796161-116796182 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr7:116796155-116798344 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
chr7:116797974-116797995 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
chr7:116797763-116797784 Luciferase Reporter Assay NEGATIVE DIRECT TarBase 7.0
High-throughput experiments (4 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Boudreau RL et al. 2014 IP Brain N/A N/A N/A
Location Method Result Regulation Validation Type Source
chr7:116798272-116798295 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:116798272-116798295 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:116798272-116798295 HITS-CLIP POSITIVE DIRECT TarBase 8.0
chr7:116798272-116798295 HITS-CLIP POSITIVE DIRECT TarBase 8.0
SIRT1 hsa-miR-34a-5p low: 6 high: 4 3 4 4 -
Low-throughput experiments (4 positive, 2 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Jiyoung Lee et al. 2010 WB qP N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 6.0