Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34c-3p


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Filters
Interactions: 147, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
GNS hsa-miR-34c-3p low: 0 high: 2 1 2 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:64716683-64716711 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr12:64716683-64716711 HITS-CLIP POSITIVE DIRECT TarBase 7.0
XRCC6 hsa-miR-34c-3p low: 0 high: 2 1 2 1 -
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr22:41636626-41636649 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr22:41636626-41636649 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CD44 hsa-miR-34c-3p low: 0 high: 2 1 1 1 0.688
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr11:35231378-35231402 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr11:35214912-35214936 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HSPA9 hsa-miR-34c-3p low: 0 high: 2 1 1 1 0.613
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:138555875-138555894 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr5:138555856-138555884 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PLEKHB2 hsa-miR-34c-3p low: 0 high: 2 1 1 1 0.633
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:131148636-131148654 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr2:131147126-131147147 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ATP13A3 hsa-miR-34c-3p low: 0 high: 2 1 1 1 0.534
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:194405493-194405512 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr3:194404069-194404093 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PEG10 hsa-miR-34c-3p low: 0 high: 2 1 1 1 0.785
High-throughput experiments (2 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr7:94669494-94669513 HITS-CLIP POSITIVE DIRECT TarBase 7.0
chr7:94669382-94669410 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ARF3 hsa-miR-34c-3p low: 0 high: 1 2 2 2 0.535
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr12:48937110-48937135 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Other Databases
Publication Methods Tissue Cell line Tested cell line Exp. condition
Whisnant Adam W et al. 2013 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
KDM1A hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chr1:23081489-23081516 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PRKAR2B hsa-miR-34c-3p low: 0 high: 1 1 1 1 0.936
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:107159711-107159734 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MYCBP2 hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:77176536-77176557 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PIK3C2A hsa-miR-34c-3p low: 0 high: 1 1 1 1 0.496
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr11:17119256-17119280 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MBTPS2 hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS27A N/A N/A
Location Method Result Regulation Validation Type Source
chrX:21882519-21882547 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CNTN1 hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr12:40936817-40936836 HITS-CLIP POSITIVE DIRECT TarBase 7.0
WWTR1 hsa-miR-34c-3p low: 0 high: 1 1 1 1 0.465
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:149517605-149517625 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HSF2 hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr6:122432177-122432199 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CTNNA1 hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:138934881-138934907 HITS-CLIP POSITIVE DIRECT TarBase 7.0
BCAT1 hsa-miR-34c-3p low: 0 high: 1 1 1 1 0.780
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Balakrishnan I et al. 2014 IP Bone Marrow HS5 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:24817865-24817883 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SNAP91 hsa-miR-34c-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr6:83554019-83554039 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PHLPP1 hsa-miR-34c-3p low: 0 high: 1 1 1 1 0.570
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr18:62903027-62903054 HITS-CLIP POSITIVE DIRECT TarBase 7.0