Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-519a-3p


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Interactions: 49, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
PTEN hsa-miR-519a-3p low: 6 high: 1 3 5 4 0.951
Low-throughput experiments (6 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ward A. et al. 2014 RP Mammary Gland MCF7 MCF7 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Ward A. et al. 2014 RP Kidney HEK293T HEK293T N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Ward A. et al. 2014 RP Mammary Gland MCF7TAMR7 MCF7TAMR7 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Francesca Fornari et al. 2012 WB qP RP Liver HEPG2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
chr10:87965351-87966135 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr10:87965870-87965891 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CDKN1A hsa-miR-519a-3p low: 3 high: 0 1 3 2 -
Low-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ward A. et al. 2014 RP Mammary Gland MCF7 MCF7 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Ward A. et al. 2014 RP Kidney HEK293T HEK293T N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Ward A. et al. 2014 RP Mammary Gland MCF7TAMR7 MCF7TAMR7 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
RB1 hsa-miR-519a-3p low: 3 high: 0 1 3 2 -
Low-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Ward A. et al. 2014 RP Mammary Gland MCF7 MCF7 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Ward A. et al. 2014 RP Kidney HEK293T HEK293T N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
Ward A. et al. 2014 RP Mammary Gland MCF7TAMR7 MCF7TAMR7 N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
TIMP2 hsa-miR-519a-3p low: 3 high: 0 1 1 1 0.843
Low-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francesca Fornari et al. 2012 WB qP RP Liver HEPG2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
UNKNOWN Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
AKT3 hsa-miR-519a-3p low: 3 high: 0 1 1 1 -
Low-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francesca Fornari et al. 2012 WB qP RP Liver HEPG2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
chr1:243503841-243504582 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
CDKN1A hsa-miR-519a-3p low: 3 high: 0 1 1 1 0.882
Low-throughput experiments (3 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Francesca Fornari et al. 2012 WB qP RP Liver HEPG2 N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Western Blot POSITIVE INDIRECT TarBase 7.0
UNKNOWN qPCR POSITIVE INDIRECT TarBase 7.0
chr6:36685804-36687211 Luciferase Reporter Assay POSITIVE DIRECT TarBase 7.0
DICER1 hsa-miR-519a-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Y Huang et al. 2011 RP Head/Neck HNSCC HNSCC N/A
Location Method Result Regulation Validation Type Source
chr14:95087151-95090519 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
YES1 hsa-miR-519a-3p low: 1 high: 0 1 1 1 -
Low-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Y Huang et al. 2011 RP Head/Neck HNSCC HNSCC N/A
Location Method Result Regulation Validation Type Source
chr18:722159-724391 Luciferase Reporter Assay POSITIVE DIRECT TarBase 8.0
SHOC2 hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.865
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr10:111012946-111012968 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZBTB4 hsa-miR-519a-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr17:7460222-7460241 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MAP1B hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.934
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr5:72206199-72206220 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KLF10 hsa-miR-519a-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr8:102651647-102651661 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ARX hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.862
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chrX:25004155-25004171 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FARP2 hsa-miR-519a-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr2:241443340-241443366 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MED17 hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.826
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr11:93788135-93788155 HITS-CLIP POSITIVE DIRECT TarBase 7.0
AP2S1 hsa-miR-519a-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr19:46846078-46846105 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SUGP2 hsa-miR-519a-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr19:18992992-18993014 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PFN2 hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.992
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr3:149965572-149965596 HITS-CLIP POSITIVE DIRECT TarBase 7.0
DNAJA1 hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.542
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr9:33039485-33039504 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PTPN4 hsa-miR-519a-3p low: 0 high: 1 1 1 1 0.993
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr2:119977195-119977217 HITS-CLIP POSITIVE DIRECT TarBase 7.0