Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34b-3p


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Filters
Interactions: 377, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
GFPT1 hsa-miR-34b-3p low: 0 high: 1 2 2 2 0.855
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:69323167-69323189 HITS-CLIP POSITIVE DIRECT TarBase 7.0
Other Databases
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kishore S et al. 2011 O N/A N/A N/A N/A
Location Method Result Regulation Validation Type Source
UNKNOWN Other UNKNOWN UNKNOWN miRTarBase
KDM1A hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:23081489-23081517 HITS-CLIP POSITIVE DIRECT TarBase 7.0
IDS hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.730
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chrX:149480873-149480891 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MBTPS2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chrX:21882524-21882548 HITS-CLIP POSITIVE DIRECT TarBase 7.0
RFC1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr4:39308630-39308637 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CTNNA1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:138934897-138934916 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SZRD1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:16397012-16397039 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PUM2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:20253956-20253978 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZC3H11A hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:203852366-203852391 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ST3GAL6 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:98793879-98793887 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SPEN hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.505
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:15876623-15876644 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MAP2K4 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.843
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:12141423-12141445 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SLK hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.741
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr10:103990743-103990765 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MTHFD2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.860
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:74214733-74214742 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ASPM hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:197084253-197084270 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MYO9A hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.594
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:71880367-71880386 HITS-CLIP POSITIVE DIRECT TarBase 7.0
EVI5 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:92509269-92509287 HITS-CLIP POSITIVE DIRECT TarBase 7.0
KIF2A hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.936
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:62385982-62385990 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MAST4 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:67169376-67169398 HITS-CLIP POSITIVE DIRECT TarBase 7.0
VPS35 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.456
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr16:46679128-46679144 HITS-CLIP POSITIVE DIRECT TarBase 7.0