Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34b-3p


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Interactions: 377, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
TFPI2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr7:93886717-93886744 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GRB10 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:50592632-50592659 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CASP2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.595
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:143305414-143305436 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZKSCAN1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.747
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:100039499-100039516 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TMEM248 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.493
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:66951119-66951127 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CCNJ hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr10:96058236-96058243 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FAM208B hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr10:5748211-5748225 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CCDC6 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.669
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr10:59792218-59792229 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NUFIP2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.952
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29264227-29264246 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CPD hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.801
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:30467456-30467472 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MGP hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.535
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr12:14881923-14881951 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SLC38A1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:46187459-46187482 HITS-CLIP POSITIVE DIRECT TarBase 7.0
STK38 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr6:36499911-36499933 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ACOT13 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.577
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr6:24697899-24697918 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HMGCS1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:43289734-43289758 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HMGCR hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.777
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:75361812-75361840 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CSNK1A1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.471
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:149495531-149495552 HITS-CLIP POSITIVE DIRECT TarBase 7.0
UBE3A hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:25337696-25337718 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TFG hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:100748779-100748787 HITS-CLIP POSITIVE DIRECT TarBase 7.0
C3orf52 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.840
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:112118042-112118052 HITS-CLIP POSITIVE DIRECT TarBase 7.0