Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34b-3p


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Filters
Interactions: 377, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
USP22 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:21001898-21001924 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GLO1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.790
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr6:38676345-38676364 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TM9SF2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.491
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr13:99562942-99562961 HITS-CLIP POSITIVE DIRECT TarBase 7.0
INSIG2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.733
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:118096718-118096746 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CASD1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.577
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr7:94556036-94556043 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PALLD hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.701
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr4:168928068-168928081 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MTUS1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr8:17643850-17643871 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PXDN hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.729
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:1632495-1632516 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ATXN10 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.630
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr22:45740494-45740500 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MCCC2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.746
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:71658620-71658648 HITS-CLIP POSITIVE DIRECT TarBase 7.0
HSD17B4 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:119542071-119542078 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FAM127A hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chrX:135032875-135032881 HITS-CLIP POSITIVE DIRECT TarBase 7.0
DSC2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr18:31066882-31066908 HITS-CLIP POSITIVE DIRECT TarBase 7.0
STT3A hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr11:125604165-125604193 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SYNCRIP hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr6:85610215-85610233 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GNS hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr12:64716682-64716690 HITS-CLIP POSITIVE DIRECT TarBase 7.0
RC3H1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:173932161-173932170 HITS-CLIP POSITIVE DIRECT TarBase 7.0
EIF4E2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr2:232567828-232567848 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CALCOCO2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.790
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:48863447-48863475 HITS-CLIP POSITIVE DIRECT TarBase 7.0
DCAF7 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:63593775-63593796 HITS-CLIP POSITIVE DIRECT TarBase 7.0