Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34b-3p


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Filters
Interactions: 377, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
MTMR12 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:32228714-32228721 HITS-CLIP POSITIVE DIRECT TarBase 7.0
THRB hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:24119159-24119181 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CACUL1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.585
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr10:118686125-118686149 HITS-CLIP POSITIVE DIRECT TarBase 7.0
EPG5 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr18:45954449-45954455 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MBNL1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:152463949-152463972 HITS-CLIP POSITIVE DIRECT TarBase 7.0
PTPRK hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr6:127969412-127969433 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ANKRD40 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:50695061-50695068 HITS-CLIP POSITIVE DIRECT TarBase 7.0
USP25 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.468
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr21:15818765-15818793 HITS-CLIP POSITIVE DIRECT TarBase 7.0
LARP1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.805
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:154817481-154817500 HITS-CLIP POSITIVE DIRECT TarBase 7.0
RNF20 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr9:101540344-101540350 HITS-CLIP POSITIVE DIRECT TarBase 7.0
MAPK13 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr6:36140603-36140615 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SMG1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.833
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr16:18805019-18805041 HITS-CLIP POSITIVE DIRECT TarBase 7.0
C2CD2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.456
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr21:41885250-41885278 HITS-CLIP POSITIVE DIRECT TarBase 7.0
B4GALT5 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.675
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr20:49635126-49635144 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NAE1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr16:66802973-66802992 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TAOK1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.565
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr17:29543736-29543756 HITS-CLIP POSITIVE DIRECT TarBase 7.0
USP24 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.498
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:55154754-55154782 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NFIA hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.593
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:61458066-61458090 HITS-CLIP POSITIVE DIRECT TarBase 7.0
WDR26 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.686
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:224389748-224389774 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GNPDA2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.513
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr4:44722167-44722186 HITS-CLIP POSITIVE DIRECT TarBase 7.0