Please cite:
Dimitra Karagkouni, Maria D. Paraskevopoulou, Serafeim Chatzopoulos, Ioannis S. Vlachos, Spyros Tastsoglou, Ilias Kanellos, Dimitris Papadimitriou, Ioannis Kavakiotis, Sofia Maniou, Giorgos Skoufos, Thanasis Vergoulis, Theodore Dalamagas, Artemis G. Hatzigeorgiou; DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA–gene interactions, Nucleic Acids Research, gkx1141, https://doi.org/10.1093/nar/gkx1141
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hsa-miR-34b-3p


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Filters
Interactions: 377, Experiments: (low: , high: , unknown: ) Cell lines: , Tissues: , Publications:
Gene name miRNA name Experiments
throughput
Publications Cell lines Tissues Pred. Score
RYBP hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.716
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:72376303-72376311 HITS-CLIP POSITIVE DIRECT TarBase 7.0
C3orf17 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.896
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr3:113005503-113005525 HITS-CLIP POSITIVE DIRECT TarBase 7.0
RCHY1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr4:75482315-75482335 HITS-CLIP POSITIVE DIRECT TarBase 7.0
OTUD4 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.726
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr4:145138493-145138512 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SFXN1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.580
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:175527772-175527789 HITS-CLIP POSITIVE DIRECT TarBase 7.0
GALNT10 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.665
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:154420928-154420947 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TP53INP1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr8:94940089-94940109 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZHX1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.845
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr8:123249912-123249924 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FBXO33 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr14:39398427-39398442 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NSD1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.497
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr5:177210275-177210302 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CPSF2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.762
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr14:92161969-92161992 HITS-CLIP POSITIVE DIRECT TarBase 7.0
TAF1D hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr11:93738378-93738401 HITS-CLIP POSITIVE DIRECT TarBase 7.0
NGFRAP1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.489
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chrX:103377844-103377862 HITS-CLIP POSITIVE DIRECT TarBase 7.0
YWHAB hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.557
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr20:44908224-44908249 HITS-CLIP POSITIVE DIRECT TarBase 7.0
CD300A hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr17:74470155-74470174 HITS-CLIP POSITIVE DIRECT TarBase 7.0
SF1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr11:64764747-64764754 HITS-CLIP POSITIVE DIRECT TarBase 7.0
IRF2BP2 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr1:234606091-234606106 HITS-CLIP POSITIVE DIRECT TarBase 7.0
ZBTB5 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr9:37438267-37438294 HITS-CLIP POSITIVE DIRECT TarBase 7.0
FEM1B hsa-miR-34b-3p low: 0 high: 1 1 1 1 0.945
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Pillai MM et al. 2014 IP Mammary Gland BT474 N/A N/A
Location Method Result Regulation Validation Type Source
chr15:68290061-68290089 HITS-CLIP POSITIVE DIRECT TarBase 7.0
UQCRFS1 hsa-miR-34b-3p low: 0 high: 1 1 1 1 -
High-throughput experiments (1 positive, 0 negative)
Publication Methods Tissue Cell line Tested cell line Exp. condition
Kameswaran V et al. 2014 IP Pancreas BETA Cells N/A N/A
Location Method Result Regulation Validation Type Source
chr19:29207556-29207576 HITS-CLIP POSITIVE DIRECT TarBase 7.0